STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3907Superfamily protein. (240 aa)    
Predicted Functional Partners:
amb3906
Predicted permease.
 
     0.837
amb0261
Membrane-associated phospholipid phosphatase.
 
  
 0.613
amb0530
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family.
   
 0.598
amb1622
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family.
 
   
 0.596
amb3908
Cold shock protein.
 
     0.565
amb3905
Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.559
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
      0.502
amb0262
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family.
 
   
 0.436
amb1346
Hypothetical protein.
  
     0.419
amb1127
Predicted ATPase.
  
     0.414
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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