STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3915CobS protein. (333 aa)    
Predicted Functional Partners:
amb3916
CobT protein.
 
 
 0.996
amb4427
Cobalamin biosynthesis protein CobN and related Mg-chelatase.
     
 0.916
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.902
amb3905
Uncharacterized conserved protein; Belongs to the Cob(I)alamin adenosyltransferase family.
     
  0.900
amb4475
ATP:corrinoid adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.
     
  0.900
amb3914
DnaJ-class molecular chaperone.
 
     0.835
amb3917
Signal transduction histidine kinase.
       0.727
amb2942
Nitric oxide reductase activation protein.
  
  
 0.709
amb2945
Cytochrome c, mono- and diheme variants.
  
  
 0.676
amb3913
Stress-induced morphogen; Activity unknown; Belongs to the BolA/IbaG family.
       0.651
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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