Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
amb3917Signal transduction histidine kinase. (547 aa)    
Predicted Functional Partners:
amb3916
CobT protein.
       0.773
amb3915
CobS protein.
       0.727
amb3914
DnaJ-class molecular chaperone.
       0.660
amb2646
DNA-directed RNA polymerase specialized sigma subunit; Sigma24 homolog.
 
   
 0.533
amb1873
Signal transduction histidine kinase.
     
 0.518
amb3913
Stress-induced morphogen; Activity unknown; Belongs to the BolA/IbaG family.
       0.486
amb2205
Signal transduction histidine kinase.
     
 0.467
bamA
Outer membrane protein/protective antigen OMA87; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
    0.444
amb1466
Predicted ATPase.
  
  
 0.434
amb1947
Predicted ATPase.
  
  
 0.434
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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