Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amb1123 | amb2961 | amb1123 | amb2961 | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.864 |
| amb1123 | amb3940 | amb1123 | amb3940 | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | Molecular chaperone; Belongs to the small heat shock protein (HSP20) family. | 0.713 |
| amb1123 | dnaK | amb1123 | amb4440 | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.889 |
| amb1123 | grpE | amb1123 | amb4496 | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.849 |
| amb1123 | hscA | amb1123 | amb3024 | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | Molecular chaperone; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.884 |
| amb1123 | htpG | amb1123 | amb4343 | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | Molecular chaperone, HSP90 family; Molecular chaperone. Has ATPase activity. | 0.773 |
| amb1560 | amb2961 | amb1560 | amb2961 | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | Hypothetical protein. | 0.864 |
| amb1560 | amb3940 | amb1560 | amb3940 | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | Molecular chaperone; Belongs to the small heat shock protein (HSP20) family. | 0.713 |
| amb1560 | dnaK | amb1560 | amb4440 | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | Molecular chaperone; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.889 |
| amb1560 | grpE | amb1560 | amb4496 | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.849 |
| amb1560 | hscA | amb1560 | amb3024 | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | Molecular chaperone; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB. | 0.884 |
| amb1560 | htpG | amb1560 | amb4343 | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | Molecular chaperone, HSP90 family; Molecular chaperone. Has ATPase activity. | 0.773 |
| amb2961 | amb1123 | amb2961 | amb1123 | Hypothetical protein. | ATPase with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family. | 0.864 |
| amb2961 | amb1560 | amb2961 | amb1560 | Hypothetical protein. | ATPase with chaperone activity; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE. Acts before DnaK, in the processing of protein aggregates. Protein binding stimulates the ATPase activity; ATP hydrolysis unfolds the denatured protein aggregates, which probably helps expose new hydrophobic binding sites on the surface of ClpB-bound aggregates, contributing to the solubilization and refolding of denatured protein aggregates by DnaK. | 0.864 |
| amb2961 | amb3940 | amb2961 | amb3940 | Hypothetical protein. | Molecular chaperone; Belongs to the small heat shock protein (HSP20) family. | 0.504 |
| amb2961 | grpE | amb2961 | amb4496 | Hypothetical protein. | Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...] | 0.928 |
| amb2961 | htpG | amb2961 | amb4343 | Hypothetical protein. | Molecular chaperone, HSP90 family; Molecular chaperone. Has ATPase activity. | 0.953 |
| amb3706 | amb3940 | amb3706 | amb3940 | Predicted dioxygenase; Belongs to the MEMO1 family. | Molecular chaperone; Belongs to the small heat shock protein (HSP20) family. | 0.512 |
| amb3939 | amb3940 | amb3939 | amb3940 | Hypothetical protein. | Molecular chaperone; Belongs to the small heat shock protein (HSP20) family. | 0.838 |
| amb3939 | amb3941 | amb3939 | amb3941 | Hypothetical protein. | NTP pyrophosphohydrolase including oxidative damage repair enzyme. | 0.432 |
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