STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb3948Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. (292 aa)    
Predicted Functional Partners:
amb0310
MeaA protein.
  
 0.697
amb1422
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
    
 0.693
amb2262
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
    
 0.690
amb1624
Hypothetical protein.
  
  
 0.615
amb3949
Pyridoxal/pyridoxine/pyridoxamine kinase.
       0.608
amb0816
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
  
 0.577
amb0879
Uncharacterized conserved protein.
  
  
 0.547
amb1331
Fumarate hydratase class I aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.510
amb2609
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
  
 0.506
amb1653
Predicted acyl-CoA transferase/carnitine dehydratase; Belongs to the CoA-transferase III family.
 
  
 0.499
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.