STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb3999Permease of the major facilitator superfamily. (522 aa)    
Predicted Functional Partners:
amb3998
Multidrug resistance efflux pump.
 
 0.997
amb4000
Response regulator containing a CheY-like receiver domain and a GGDEF domain.
       0.671
amb3997
Pirin-related protein; Belongs to the pirin family.
     
 0.542
amb1874
Outer membrane protein.
 
 
 0.502
amb2245
Outer membrane protein.
  
 
 0.500
amb2315
Outer membrane protein.
 
 
 0.470
amb3431
Outer membrane protein.
 
 
 0.457
amb1949
Phenolpthiocerol synthesis polyketide synthase ppsA.
     
 0.431
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.