STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4059Outer membrane protein. (494 aa)    
Predicted Functional Partners:
amb4057
Membrane-fusion protein.
 
 
 0.897
amb1141
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.853
amb1142
Membrane-fusion protein.
 
 
 0.852
amb3273
Membrane-fusion protein.
 
 
 0.852
amb0943
Membrane-fusion protein.
 
 
 0.848
amb1143
Hypothetical protein.
 
 
 0.848
amb3272
Hypothetical protein.
 
 
 0.848
amb3274
Membrane-fusion protein; Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.847
amb4058
ABC-type protease/lipase transport system, ATPase and permease components.
  
  
 0.837
amb3275
RTX toxins and related Ca2+-binding protein.
 
  
 0.763
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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