STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4085Hypothetical protein. (126 aa)    
Predicted Functional Partners:
amb3836
Hypothetical protein.
  
     0.768
amb3472
Uncharacterized protein conserved in bacteria.
  
     0.758
amb0558
Hypothetical protein.
  
     0.754
amb0627
Hypothetical protein.
  
     0.750
amb3503
Hypothetical protein.
  
     0.749
amb4110
Hypothetical protein.
  
     0.744
amb3893
Uncharacterized protein conserved in bacteria.
  
     0.741
amb0501
FlbE protein.
  
     0.699
amb3823
Flagellar assembly protein fliX.
  
     0.693
amb2246
Uncharacterized protein conserved in bacteria.
  
     0.687
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.