STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4098Hypothetical signaling protein CC0091. (893 aa)    
Predicted Functional Partners:
amb4099
FOG: EAL domain.
     0.994
amb0770
EAL domain.
 
 
 0.804
amb1414
Predicted signal transduction protein containing a membrane domain; EAL and a GGDEF domain.
 
 
 0.801
amb3329
Hypothetical 1041 kDa protein in hypE 3'region.
 
 
0.781
amb3300
Predicted signal transduction protein containing sensor and EAL domains.
  
    0.778
amb1669
Predicted signal transduction protein containing sensor and EAL domains.
  
    0.776
amb1853
EAL domain.
  
    0.763
amb0915
EAL domain.
 
  
 0.761
amb4100
FOG: CheY-like receiver.
       0.710
amb2530
FOG: GGDEF domain.
  
  
 0.651
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.