STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4100FOG: CheY-like receiver. (123 aa)    
Predicted Functional Partners:
amb1968
Signal transduction histidine kinase.
 
 0.979
amb3048
Signal transduction histidine kinase.
 
 
 0.978
amb2546
Signal transduction histidine kinase.
  
 
  0.977
amb0667
Signal transduction histidine kinase.
  
 
  0.976
amb3570
FOG: CheY-like receiver.
  
 
0.920
amb0918
CheY-like receiver.
  
 
 
0.915
amb3235
FOG: CheY-like receiver.
  
   0.794
amb2850
Signal transduction histidine kinase.
 
 
 
 0.792
amb3096
Signal transduction histidine kinase.
 
 
 
 0.789
amb0567
Signal transduction histidine kinase.
 
 
 
 0.785
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.