STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4111Putative periplasmic protein kinase ArgK and related GTPase of G3E family. (329 aa)    
Predicted Functional Partners:
amb0310
MeaA protein.
  
 0.992
amb4240
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
  
 0.986
amb4239
Methylmalonyl-CoA mutase, C-terminal domain/subunit.
 
  
 0.910
amb4112
Hypothetical protein.
       0.773
amb4113
Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.
       0.737
amb2575
Lactoylglutathione lyase and related lyase.
 
  
 0.726
amb4110
Hypothetical protein.
       0.553
amb4114
Uncharacterized protein involved in an early stage of isoprenoid biosynthesis.
       0.532
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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