Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| amb4111 | amb4112 | amb4111 | amb4112 | Putative periplasmic protein kinase ArgK and related GTPase of G3E family. | Hypothetical protein. | 0.773 |
| amb4111 | amb4113 | amb4111 | amb4113 | Putative periplasmic protein kinase ArgK and related GTPase of G3E family. | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.737 |
| amb4111 | amb4114 | amb4111 | amb4114 | Putative periplasmic protein kinase ArgK and related GTPase of G3E family. | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | 0.532 |
| amb4112 | amb4111 | amb4112 | amb4111 | Hypothetical protein. | Putative periplasmic protein kinase ArgK and related GTPase of G3E family. | 0.773 |
| amb4112 | amb4113 | amb4112 | amb4113 | Hypothetical protein. | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.737 |
| amb4112 | amb4114 | amb4112 | amb4114 | Hypothetical protein. | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | 0.532 |
| amb4113 | amb4111 | amb4113 | amb4111 | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Putative periplasmic protein kinase ArgK and related GTPase of G3E family. | 0.737 |
| amb4113 | amb4112 | amb4113 | amb4112 | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Hypothetical protein. | 0.737 |
| amb4113 | amb4114 | amb4113 | amb4114 | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | 0.570 |
| amb4114 | amb4111 | amb4114 | amb4111 | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | Putative periplasmic protein kinase ArgK and related GTPase of G3E family. | 0.532 |
| amb4114 | amb4112 | amb4114 | amb4112 | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | Hypothetical protein. | 0.532 |
| amb4114 | amb4113 | amb4114 | amb4113 | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues. | 0.570 |
| amb4114 | rpsO | amb4114 | amb4116 | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | Ribosomal protein S15P/S13E; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.542 |
| amb4114 | truB | amb4114 | amb4115 | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.486 |
| rpsO | amb4114 | amb4116 | amb4114 | Ribosomal protein S15P/S13E; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | 0.542 |
| rpsO | truB | amb4116 | amb4115 | Ribosomal protein S15P/S13E; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.967 |
| truB | amb4114 | amb4115 | amb4114 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | Uncharacterized protein involved in an early stage of isoprenoid biosynthesis. | 0.486 |
| truB | rpsO | amb4115 | amb4116 | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | Ribosomal protein S15P/S13E; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.967 |