STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4128L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (751 aa)    
Predicted Functional Partners:
amb4130
Uncharacterized conserved protein containing a ferredoxin-like domain.
 
  
 0.950
amb4454
L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase.
 
  
 0.934
amb4132
FAD/FMN-containing dehydrogenase.
 
  
 0.916
amb4131
Uncharacterized conserved protein.
 
  
 0.903
amb4129
Fe-S oxidoreductase.
 
  
 0.887
amb0238
Transcriptional regulator.
  
 0.842
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.819
mdh
Malate/lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.650
amb1553
Transcriptional regulator.
 
  
 0.561
amb0260
Permease of the major facilitator superfamily.
  
   
 0.538
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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