Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb4129Fe-S oxidoreductase. (266 aa)    
Predicted Functional Partners:
amb4130
Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.999
amb4131
Uncharacterized conserved protein.
 
 
 0.987
amb2985
FAD/FMN-containing dehydrogenase.
  
 0.924
amb3953
Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Msp2.
 
 
   0.913
amb4132
FAD/FMN-containing dehydrogenase.
 
  
0.891
amb4128
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
  
 0.858
amb0813
Uncharacterized protein; Possibly involved in utilization of glycolate and propanediol.
  
  
 0.828
amb3713
FAD/FMN-containing dehydrogenase.
  
 0.711
amb4133
Enoyl-CoA hydratase/carnithine racemase.
  
  
 0.613
amb2225
Cytochrome b subunit of the bc complex.
     
 0.524
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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