Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb4131Uncharacterized conserved protein. (216 aa)    
Predicted Functional Partners:
amb4130
Uncharacterized conserved protein containing a ferredoxin-like domain.
 
 
 0.997
amb4129
Fe-S oxidoreductase.
 
 
 0.987
amb4132
FAD/FMN-containing dehydrogenase.
 
 
 0.983
amb4128
L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
 
   
 0.872
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.801
amb3374
Fe-S oxidoreductase.
 
 
 0.691
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.670
amb4133
Enoyl-CoA hydratase/carnithine racemase.
       0.578
amb0289
NADP-dependent malic enzyme.
  
  
 0.577
amb0720
NADP-dependent malic enzyme.
  
  
 0.577
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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