STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4150Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (297 aa)    
Predicted Functional Partners:
amb3180
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.676
amb3308
Transcriptional regulator.
  
     0.646
amb3170
Transcriptional regulator.
  
     0.645
amb3232
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.608
amb0249
Nitrogen assimilation control protein; Belongs to the LysR transcriptional regulatory family.
  
     0.597
amb4149
Permease of the major facilitator superfamily.
  
  
 0.567
amb4148
Predicted alpha/beta hydrolase.
       0.563
amb0521
Glutamate synthase [NADPH] large chain precursor.
  
  
 0.511
amb4146
Signal transduction histidine kinase.
  
  
 0.485
amb4145
FOG: CheY-like receiver.
  
  
 0.442
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.