Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
amb4152FOG: CheY-like receiver. (123 aa)    
Predicted Functional Partners:
amb4153
Chemotaxis protein CheC; Inhibitor of MCP methylation.
 
     0.865
amb0650
Predicted periplasmic ligand-binding sensor domain.
 
 
 0.832
amb1110
Signal transduction histidine kinase.
 
 
 
 0.820
amb4154
Hypothetical 918 kDa protein Y4LL.
  
  
 0.812
amb2930
Sensor protein barA.
 
 
 
 0.799
amb1432
Signal transduction histidine kinase.
   
 
 0.786
amb2293
Signal transduction histidine kinase.
 
 
 
 0.785
amb1841
Hypothetical protein.
 
 
 
 0.775
amb3438
Sensor protein gacS.
 
 
 
 0.773
amb4146
Signal transduction histidine kinase.
 
 
 
 0.772
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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