STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4185Uncharacterized protein involved in cysteine biosynthesis. (224 aa)    
Predicted Functional Partners:
amb4186
Hypothetical protein.
       0.828
amb4184
Ribokinase family.
       0.644
amb4405
Hypothetical protein.
  
     0.641
amb4404
Universal stress protein UspA and related nucleotide-binding protein.
  
     0.634
amb0021
Hypothetical protein.
  
     0.613
amb3928
Antifreeze glycopeptide polyprotein precursor.
  
     0.599
amb2072
Hypothetical protein.
  
     0.575
amb0959
Uncharacterized membrane-bound protein.
  
     0.574
amb3875
Hypothetical protein.
  
     0.570
amb4423
Uncharacterized enzyme of heme biosynthesis.
  
     0.561
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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