Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb4190Protein rdxB. (481 aa)    
Predicted Functional Partners:
amb4365
Cytochrome c, mono- and diheme variants; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.972
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
  
 0.967
amb4367
Predicted integral membrane protein linked to a cation pump.
 
  
 0.889
amb4364
Hypothetical protein.
  
  
 0.841
amb2698
Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.815
amb4368
Cation transport ATPase.
 
  
 0.784
amb0516
Uncharacterized conserved protein.
 
     0.723
amb2910
Uncharacterized conserved protein.
 
     0.691
amb4189
Membrane protein related to metalloendopeptidase.
       0.500
amb2944
Nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.490
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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