STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4191Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain. (157 aa)    
Predicted Functional Partners:
amb1050
Signal transduction histidine kinase.
 
 
 
 0.783
amb1043
Signal transduction histidine kinase.
 
 
 
 0.752
amb1872
PAS/PAC domain.
 
 
 0.710
amb2954
Signal transduction histidine kinase.
 
 
 
 0.642
gloB
Zn-dependent hydrolase, including glyoxylase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
       0.618
amb0496
ATPase involved in chromosome partitioning.
  
 
 0.559
amb2936
Predicted ATPase.
 
 
 0.555
amb1110
Signal transduction histidine kinase.
  
 
 0.542
amb1466
Predicted ATPase.
 
 
 0.542
amb1947
Predicted ATPase.
 
 
 0.541
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.