Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
amb4193SAM-dependent methyltransferase. (240 aa)    
Predicted Functional Partners:
amb2261
Recombinational DNA repair protein; RecF pathway.
  
   
 0.708
amb2071
Predicted hydrolase of HD superfamily.
  
     0.692
gloB
Zn-dependent hydrolase, including glyoxylase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.685
amb2251
Uncharacterized conserved protein.
  
     0.667
amb0787
Glutathione S-transferase.
 
   
 0.630
amb0548
Signal transduction histidine kinase.
  
     0.581
amb3674
DNA polymerase III, chi subunit.
  
     0.531
amb3051
Transcriptional regulator.
  
     0.528
amb3225
Uncharacterized protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
  
   
 0.519
amb1330
Uncharacterized protein; Conserved in bacteria.
  
   
 0.515
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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