STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4229Predicted transcriptional regulator; Belongs to the peptidase S24 family. (223 aa)    
Predicted Functional Partners:
amb4233
Hypothetical protein.
 
     0.816
amb4281
Hypothetical protein.
 
     0.679
amb4230
Hypothetical protein.
       0.647
amb4231
Hypothetical protein.
       0.646
amb4228
Hypothetical protein.
       0.594
amb4267
Hypothetical protein.
 
     0.594
amb3750
Flp pilus assembly protein TadG.
  
     0.580
amb4234
Hypothetical protein.
       0.579
amb4270
Hypothetical protein.
 
     0.575
amb3751
Flp pilus assembly protein TadG.
  
     0.570
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.