Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
amb0326 | amb1466 | Chemotaxis protein histidine kinase and related kinase. | Predicted ATPase. | 0.688 |
amb0326 | amb1947 | Chemotaxis protein histidine kinase and related kinase. | Predicted ATPase. | 0.688 |
amb0326 | amb2932 | Chemotaxis protein histidine kinase and related kinase. | Methylase of chemotaxis methyl-accepting protein. | 0.974 |
amb0326 | amb2936 | Chemotaxis protein histidine kinase and related kinase. | Predicted ATPase. | 0.688 |
amb0326 | amb3004 | Chemotaxis protein histidine kinase and related kinase. | Gliding motility regulatory protein. | 0.862 |
amb0326 | amb3329 | Chemotaxis protein histidine kinase and related kinase. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.998 |
amb0326 | amb3654 | Chemotaxis protein histidine kinase and related kinase. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.998 |
amb0326 | amb4237 | Chemotaxis protein histidine kinase and related kinase. | Methyl-accepting chemotaxis protein. | 0.610 |
amb1466 | amb0326 | Predicted ATPase. | Chemotaxis protein histidine kinase and related kinase. | 0.688 |
amb1466 | amb1947 | Predicted ATPase. | Predicted ATPase. | 0.761 |
amb1466 | amb2932 | Predicted ATPase. | Methylase of chemotaxis methyl-accepting protein. | 0.953 |
amb1466 | amb2936 | Predicted ATPase. | Predicted ATPase. | 0.787 |
amb1466 | amb3004 | Predicted ATPase. | Gliding motility regulatory protein. | 0.709 |
amb1466 | amb3329 | Predicted ATPase. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.979 |
amb1466 | amb3654 | Predicted ATPase. | Hypothetical 1041 kDa protein in hypE 3'region. | 0.964 |
amb1466 | amb4237 | Predicted ATPase. | Methyl-accepting chemotaxis protein. | 0.568 |
amb1947 | amb0326 | Predicted ATPase. | Chemotaxis protein histidine kinase and related kinase. | 0.688 |
amb1947 | amb1466 | Predicted ATPase. | Predicted ATPase. | 0.761 |
amb1947 | amb2932 | Predicted ATPase. | Methylase of chemotaxis methyl-accepting protein. | 0.953 |
amb1947 | amb2936 | Predicted ATPase. | Predicted ATPase. | 0.763 |
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