STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4241Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (219 aa)    
Predicted Functional Partners:
amb0581
Carbonic anhydrase.
     
 0.918
amb3695
Sulfate permease and related transporters; MFS superfamily.
 
  
 0.795
amb4242
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
  
 0.781
amb4243
Acetyl-CoA carboxylase, carboxyltransferase component.
     
 0.777
amb1792
Carbonic anhydrase/acetyltransferase; Isoleucine patch superfamily.
    
 
 0.739
amb2675
Carbonic anhydrase/acetyltransferase; Isoleucine patch superfamily.
    
 
 0.739
amb4239
Methylmalonyl-CoA mutase, C-terminal domain/subunit.
     
 0.716
amb4240
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
 0.716
apt
Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.685
cysC
NodQ bifunctional enzyme; Catalyzes the synthesis of activated sulfate.
  
  
 0.528
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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