STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4243Acetyl-CoA carboxylase, carboxyltransferase component. (512 aa)    
Predicted Functional Partners:
amb4242
Acetyl/propionyl-CoA carboxylase, alpha subunit.
 0.999
amb0674
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.992
amb2575
Lactoylglutathione lyase and related lyase.
 
 
 0.972
amb3599
Acyl-CoA dehydrogenase.
  
 
 0.942
amb2556
Phosphotransacetylase.
  
 
 0.935
amb2242
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.932
amb2708
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
 
 
 0.921
amb1422
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 0.917
amb2304
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 0.917
amb3815
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 0.917
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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