STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4244Predicted transcriptional regulator. (476 aa)    
Predicted Functional Partners:
amb4243
Acetyl-CoA carboxylase, carboxyltransferase component.
     
 0.610
amb2804
Citrate synthase; Belongs to the citrate synthase family.
  
  
 0.601
amb4239
Methylmalonyl-CoA mutase, C-terminal domain/subunit.
     
 0.512
amb4242
Acetyl/propionyl-CoA carboxylase, alpha subunit.
       0.512
amb4240
Methylmalonyl-CoA mutase, N-terminal domain/subunit.
     
 0.504
amb4241
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.501
amb4245
Superfamily II DNA and RNA helicase.
  
     0.469
amb0849
Transcriptional regulator.
  
   
 0.441
amb2900
Predicted rRNA methylase.
     
 0.422
amb4014
Folylpolyglutamate synthase.
     
 0.411
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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