STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4296Hemerythrin-like protein MJ0747. (136 aa)    
Predicted Functional Partners:
amb4136
Hemerythrin-like protein RSc0777.
 
   
 0.846
amb4265
Hypothetical protein.
 
   
 0.846
amb1987
Hypothetical protein.
  
   
 0.813
amb2800
Hemerythrin-like protein PA1673.
 
     0.777
amb0871
Hypothetical protein.
  
     0.775
amb2739
Hemerythrin.
  
     0.775
amb2698
Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
   
  
 0.538
amb3091
Hemerythrin-like protein MJ0747.
  
     0.451
amb3260
Uncharacterized flavoprotein.
   
    0.403
amb3698
Uncharacterized flavoprotein.
   
    0.403
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.