Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4299Hypothetical protein. (89 aa)    
Predicted Functional Partners:
amb4298
Hypothetical protein.
       0.727
amb4297
Hypothetical protein.
       0.712
amb4301
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
    0.526
amb4300
Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
       0.522
amb4302
Hypothetical protein.
       0.522
amb2240
TPR repeat; SEL1 subfamily.
  
 
 0.514
amb3138
Trypsin-like serine protease; Typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.514
amb2489
Outer membrane protein.
  
 
 0.486
amb0503
Flagellar biosynthesis/type III secretory pathway lipoprotein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
   
 
 0.459
amb0504
Flagellar hook protein FlgE.
   
 
 0.458
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.