Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4319Ferredoxin II; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (123 aa)    
Predicted Functional Partners:
amb1990
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.975
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
  
 
 0.914
mdh
Malate/lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
  
 0.784
amb0607
Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
  
 0.783
amb1680
NADH dependant phenylglyoxylate.
  
 
 0.607
amb0285
Hypothetical protein RP006.
 
 
 0.572
amb1678
NADH dependant phenylglyoxylate.
  
 
 0.546
amb2146
Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase, beta subunit.
  
 
 0.540
amb4320
Membrane protein TerC; Possibly involved in tellurium resistance.
       0.539
amb4318
Transcriptional regulator; Similar to M xanthus CarD.
       0.528
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.