STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4333Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (554 aa)    
Predicted Functional Partners:
amb2627
Predicted membrane protein.
  
 0.916
amb1545
Predicted membrane protein.
 
  
 0.907
amb2729
Predicted membrane protein.
 
  
 0.905
amb1544
Predicted signal-transduction protein containing cAMP-binding and CBS domains.
 
  
 0.689
amb4334
ABC-type Co2+ transport system, periplasmic component.
       0.501
amb4335
ABC-type Co2+ transport system, permease component.
       0.472
amb4336
Hypothetical protein.
       0.472
amb4337
ABC-type cobalt transport system, permease component CbiQ and related transporters.
       0.472
amb4338
ABC-type cobalt transport system, ATPase component.
       0.472
amb0580
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
  
 0.439
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.