STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4338ABC-type cobalt transport system, ATPase component. (232 aa)    
Predicted Functional Partners:
amb4337
ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 0.998
amb4335
ABC-type Co2+ transport system, permease component.
 
 
 0.992
amb0277
ABC-type cobalt transport system; Permease component CbiQ and related transporters.
 
 0.990
amb4334
ABC-type Co2+ transport system, periplasmic component.
 
  
 0.988
amb4336
Hypothetical protein.
 
     0.950
amb0278
ABC-type cobalt transport system; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
  
  
 
0.912
cbiN
ABC-type cobalt transport system; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
 
 0.899
amb3623
ABC-type multidrug transport system, ATPase component.
 
   
0.897
cbiM
ABC-type Co2+ transport system; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 
 0.873
amb2766
ABC-type antimicrobial peptide transport system; ATPase component.
 
    
0.743
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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