STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4366Polyferredoxin. (485 aa)    
Predicted Functional Partners:
amb4365
Cytochrome c, mono- and diheme variants; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.974
amb4367
Predicted integral membrane protein linked to a cation pump.
 
  
 0.972
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
  
 0.966
amb4368
Cation transport ATPase.
 
  
 0.949
amb4364
Hypothetical protein.
  
  
 0.858
amb2698
Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.799
amb0516
Uncharacterized conserved protein.
 
   
 0.716
amb2910
Uncharacterized conserved protein.
 
   
 0.683
amb4369
Transcriptional activatory protein aadR; Anaerobic aromatic degradation regulator.
 
  
 0.561
amb2225
Cytochrome b subunit of the bc complex.
  
 
 0.534
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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