STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4368Cation transport ATPase. (782 aa)    
Predicted Functional Partners:
amb4367
Predicted integral membrane protein linked to a cation pump.
 
  
 0.950
amb4366
Polyferredoxin.
 
  
 0.948
amb4365
Cytochrome c, mono- and diheme variants; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
   
 0.887
amb4363
Cbb3-type cytochrome oxidase, cytochrome c subunit.
 
   
 0.874
amb1810
Copper chaperone.
  
 
 0.837
amb3355
Protein rdxB.
 
  
 0.784
amb4190
Protein rdxB.
 
  
 0.784
amb0516
Uncharacterized conserved protein.
 
   
 0.584
amb4369
Transcriptional activatory protein aadR; Anaerobic aromatic degradation regulator.
     
 0.507
amb2341
Riboflavin biosynthesis protein ribD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.475
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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