Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb4392Uncharacterized conserved protein, contains double-stranded beta-helix domain. (136 aa)    
Predicted Functional Partners:
amb4393
Phosphoenolpyruvate-protein kinase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
     
 0.727
amb4394
Phosphotransferase system, HPr-related protein.
       0.713
amb4395
Phosphotransferase system, mannose/fructose-specific component IIA.
       0.713
amb4396
Predicted P-loop-containing kinase; Displays ATPase and GTPase activities.
       0.713
amb4397
Serine kinase of the HPr protein, regulates carbohydrate metabolism.
       0.713
ahcY
S-adenosylhomocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.520
amb0521
Glutamate synthase [NADPH] large chain precursor.
     
 0.441
cobB
NAD-dependent protein deacetylase; SIR2 family; Belongs to the sirtuin family. Class III subfamily.
  
    0.429
amb3766
Hypothetical 1337 kDa protein Y4CA.
  
    0.429
nadD
Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
    0.418
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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