Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
amb4398Soluble lytic murein transglycosylase and related regulatory protein. (609 aa)    
Predicted Functional Partners:
amb0319
Hypothetical protein.
  
     0.631
amb3516
Cell division protein FtsI/penicillin-binding protein 2.
 
  
 0.624
amb0025
Hypothetical PE-PGRS family protein Rv1325c/MT1367 precursor; Msp1.
  
     0.605
lptD
Organic solvent tolerance protein OstA; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
  
 0.603
amb1615
Uncharacterized protein; Conserved in bacteria.
  
   
 0.578
amb3608
Rad3-related DNA helicase.
  
   
 0.570
amb0312
Uncharacterized protein; Modulates RecA activity; Belongs to the RecX family.
 
     0.563
amb0283
Membrane protein related to metalloendopeptidase.
 
   
 0.561
amb0495
DNA polymerase III; Gamma/tau subunits.
  
   
 0.559
amb2518
Membrane protein related to metalloendopeptidase.
 
   
 0.558
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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