STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amb4404Universal stress protein UspA and related nucleotide-binding protein. (155 aa)    
Predicted Functional Partners:
amb4405
Hypothetical protein.
 
     0.952
amb4406
Predicted permease.
 
   
 0.946
amb3553
Predicted permease.
 
   
 0.818
amb4185
Uncharacterized protein involved in cysteine biosynthesis.
  
     0.634
amb4252
Uncharacterized protein conserved in bacteria.
  
     0.622
amb1533
Disulfide bond formation protein DsbB.
  
     0.601
amb4403
HIRA-interacting protein 5.
     
 0.583
amb4151
Hypothetical protein.
  
     0.573
amb2350
CBP3 protein, mitochondrial precursor.
  
     0.501
amb0506
Flagellar hook-length control protein.
  
     0.500
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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