STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4413Polyferredoxin. (467 aa)    
Predicted Functional Partners:
amb4411
Uncharacterized protein probably involved in high-affinity Fe2+ transport.
 
  
 0.939
amb0939
Uncharacterized protein; Probably involved in high-affinity Fe2+ transport.
 
  
 0.845
amb0940
Uncharacterized protein; Probably involved in high-affinity Fe2+ transport.
 
  
 0.845
amb1681
High-affinity Fe2+/Pb2+ permease.
 
    0.792
amb4412
Hypothetical protein.
 
     0.724
amb0937
High-affinity Fe2+/Pb2+ permease.
 
    0.634
pgi
Glucose-6-phosphate isomerase.
  
  
 0.630
amb2225
Cytochrome b subunit of the bc complex.
  
 
 0.481
amb2687
Nitrate reductase cytochrome c-type subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.
  
  
 0.477
amb4081
N-acetylmuramoyl-L-alanine amidase.
  
     0.438
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.