Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4443Cell division protein. (298 aa)    
Predicted Functional Partners:
ftsE
Predicted ATPase involved in cell division; Part of the ABC transporter FtsEX involved in cellular division.
 
 0.999
amb4444
Uncharacterized conserved protein.
     0.978
amb0304
Membrane-bound metallopeptidase.
 
 
 
 0.936
amb4445
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.830
amb3878
Sensor protein gacS.
   
 
 0.823
amb1132
Hypothetical protein.
 
 
 
 0.784
amb0495
DNA polymerase III; Gamma/tau subunits.
  
     0.733
amb0327
Uncharacterized protein; Conserved in bacteria.
  
     0.711
amb3189
Hypothetical protein.
 
     0.698
amb1418
Predicted membrane protein.
  
     0.697
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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