Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
amb4487Alanine dehydrogenase; Belongs to the AlaDH/PNT family. (382 aa)    
Predicted Functional Partners:
amb2095
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.978
amb2823
NAD/NADP transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
      0.908
amb2464
Serine-pyruvate aminotransferase.
     
 0.904
amb4448
Putative aminotransferase MJ0959.
     
 0.904
amb1990
Pyruvate-flavodoxin oxidoreductase.
    
 0.880
amb0289
NADP-dependent malic enzyme.
  
 
 0.862
amb0720
NADP-dependent malic enzyme.
  
 
 0.862
amb2649
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; Belongs to the PEP-utilizing enzyme family.
    
 0.835
amb2145
627aa long 2-oxoacid--ferredoxin oxidoreductasealpha subunit.
     
 0.832
amb1555
Pyruvate kinase isozyme G, chloroplast; Belongs to the pyruvate kinase family.
     
 0.825
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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