Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amb4493Hypothetical protein. (351 aa)    
Predicted Functional Partners:
amb0627
Hypothetical protein.
  
     0.755
amb0501
FlbE protein.
  
     0.752
amb3823
Flagellar assembly protein fliX.
  
     0.747
amb3497
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
     0.728
amb0506
Flagellar hook-length control protein.
  
     0.726
amb3503
Hypothetical protein.
  
     0.718
amb3500
FlaA locus 229 kDa protein.
  
     0.673
amb3499
Hypothetical protein.
  
     0.650
amb1418
Predicted membrane protein.
  
     0.635
amb3816
Hypothetical protein.
  
     0.620
Your Current Organism:
Magnetospirillum magneticum
NCBI taxonomy Id: 342108
Other names: M. magneticum AMB-1, Magnetospirillum magneticum AMB-1, Magnetospirillum magneticum str. AMB-1, Magnetospirillum magneticum strain AMB-1, Magnetospirillum sp. (strain AMB-1), Magnetospirillum sp. AMB-1
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