Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
DM82_1146tape_meas_lam_C: phage tail tape measure protein, lambda family. (1354 aa)    
Predicted Functional Partners:
DM82_1147
Phage minor tail family protein.
 
     0.848
DM82_1149
phage_tail_L: phage minor tail protein L.
 
     0.839
DM82_1148
Chaperone of endosialidase family protein.
     
 0.816
DM82_1150
Hypothetical protein.
 
  
 0.807
DM82_5804
Hypothetical protein.
   
   0.751
DM82_1144
Phage tail assembly chaperone family protein.
       0.741
DM82_1145
Hypothetical protein.
       0.741
DM82_3595
Sporulation related domain protein.
    
   0.723
DM82_1141
Bacteriophage HK97-gp10, tail-component family protein.
 
    0.705
DM82_3355
Phage small terminase subunit.
 
  
 0.685
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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