Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DM82_1330Neisseria meningitidis TspB family protein. (431 aa)    
Predicted Functional Partners:
DM82_1331
Hypothetical protein.
       0.773
DM82_1332
ATPase associated with various cellular activities family protein.
       0.773
tolR
tolR: protein TolR.
  
 
 0.576
exbD_2
Biopolymer transport ExbD/TolR family protein.
  
 
 0.576
exbD_3
Biopolymer transport ExbD/TolR family protein.
  
 
 0.576
exbD_4
Biopolymer transport ExbD/TolR family protein.
  
 
 0.576
exbD_5
Biopolymer transport ExbD/TolR family protein.
  
 
 0.576
tolQ
Protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.563
tolQ_2
motA/TolQ/ExbB proton channel family protein.
  
 
 0.563
tolQ_3
motA/TolQ/ExbB proton channel family protein.
  
 
 0.563
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.