Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
DM82_1451 | DM82_1452 | Integrase core domain protein. | Transposase family protein. | 0.720 |
DM82_1451 | DM82_1454 | Integrase core domain protein. | Putative dNA transformation protein TfoX. | 0.806 |
DM82_1451 | DM82_1455 | Integrase core domain protein. | Transposase family protein. | 0.774 |
DM82_1451 | DM82_2816 | Integrase core domain protein. | Phage integrase family protein. | 0.505 |
DM82_1451 | DM82_330 | Integrase core domain protein. | Methyltransferase domain protein. | 0.485 |
DM82_1451 | DM82_332 | Integrase core domain protein. | Hypothetical protein. | 0.497 |
DM82_1451 | DM82_378 | Integrase core domain protein. | Transposase family protein. | 0.774 |
DM82_1451 | DM82_379 | Integrase core domain protein. | Integrase core domain protein. | 0.720 |
DM82_1451 | DM82_4481 | Integrase core domain protein. | Transposase family protein. | 0.774 |
DM82_1451 | DM82_4482 | Integrase core domain protein. | Integrase core domain protein. | 0.720 |
DM82_1452 | DM82_1451 | Transposase family protein. | Integrase core domain protein. | 0.720 |
DM82_1454 | DM82_1451 | Putative dNA transformation protein TfoX. | Integrase core domain protein. | 0.806 |
DM82_1454 | DM82_1455 | Putative dNA transformation protein TfoX. | Transposase family protein. | 0.878 |
DM82_1454 | DM82_2816 | Putative dNA transformation protein TfoX. | Phage integrase family protein. | 0.409 |
DM82_1454 | DM82_330 | Putative dNA transformation protein TfoX. | Methyltransferase domain protein. | 0.432 |
DM82_1454 | DM82_332 | Putative dNA transformation protein TfoX. | Hypothetical protein. | 0.433 |
DM82_1454 | DM82_378 | Putative dNA transformation protein TfoX. | Transposase family protein. | 0.787 |
DM82_1454 | DM82_4481 | Putative dNA transformation protein TfoX. | Transposase family protein. | 0.787 |
DM82_1455 | DM82_1451 | Transposase family protein. | Integrase core domain protein. | 0.774 |
DM82_1455 | DM82_1454 | Transposase family protein. | Putative dNA transformation protein TfoX. | 0.878 |
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