Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
phaRPHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR. (189 aa)    
Predicted Functional Partners:
phbC
Poly-beta-hydroxybutyrate polymerase.
 
   
 0.888
phbB-1
acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.835
phbC_2
Poly-beta-hydroxybutyrate polymerase family protein.
 
   
 0.798
DM82_1901
Phasin: phasin family domain protein.
 
   
 0.752
phaZ-2
PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular family protein.
 
   
 0.590
phaZ
PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular family protein.
 
   
 0.568
DM82_975
Hypothetical protein.
  
     0.534
thlA_1
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
   
 0.515
fixL_1
Sensory box protein.
  
     0.508
phbB
acAcCoA_reduct: acetoacetyl-CoA reductase family protein.
 
   
 0.460
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.