Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
phbCPoly-beta-hydroxybutyrate polymerase. (599 aa)    
Predicted Functional Partners:
phbB-1
acetoacetyl-CoA reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.983
phaZ-2
PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular family protein.
 
  
 0.972
phbB
acAcCoA_reduct: acetoacetyl-CoA reductase family protein.
 
 
 0.963
fadJ_1
enoyl-CoA hydratase/isomerase family protein.
     
 0.919
phbC_2
Poly-beta-hydroxybutyrate polymerase family protein.
  
  
 
0.917
phaR
PHA_reg_PhaR: polyhydroxyalkanoate synthesis repressor PhaR.
 
   
 0.888
phaZ
PHB_depoly_PhaZ: polyhydroxyalkanoate depolymerase, intracellular family protein.
 
   
 0.765
pta_2
Phosphate acetyl/butaryl transferase family protein.
  
 0.700
thlA_1
acCoA-C-Actrans: acetyl-CoA C-acetyltransferase family protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.687
DM82_996
Alpha/beta hydrolase fold family protein.
  
   
 0.660
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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