rumA protein (Burkholderia oklahomensis) - STRING interaction network

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rumA

23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. (465 aa)

Predicted Functional Partners:

lysS

0.714

DM82_5264

0.649

trmB

0.631

DM82_1498

0.625

sun

0.610

rlmB_2

0.606

lptF

0.576

rsmI_1

0.567

guaA

0.555

rsmB_2

0.555

Your Current Organism:

Burkholderia oklahomensis

NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DM82_1498	rumA	DM82_1498	DM82_1497	endonuclease/Exonuclease/phosphatase family protein.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.625
DM82_5264	guaA	DM82_5264	DM82_1711	Methyltransferase domain protein.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.430
DM82_5264	rumA	DM82_5264	DM82_1497	Methyltransferase domain protein.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.649
DM82_5264	trmB	DM82_5264	DM82_2303	Methyltransferase domain protein.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.745
guaA	DM82_5264	DM82_1711	DM82_5264	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Methyltransferase domain protein.	0.430
guaA	lysS	DM82_1711	DM82_1885	GMP synthase; Catalyzes the synthesis of GMP from XMP.	lysS_bact: lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.939
guaA	rsmB_2	DM82_1711	DM82_300	GMP synthase; Catalyzes the synthesis of GMP from XMP.	ubiE/COQ5 methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.442
guaA	rumA	DM82_1711	DM82_1497	GMP synthase; Catalyzes the synthesis of GMP from XMP.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.555
guaA	sun	DM82_1711	DM82_3307	GMP synthase; Catalyzes the synthesis of GMP from XMP.	Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.	0.540
guaA	trmB	DM82_1711	DM82_2303	GMP synthase; Catalyzes the synthesis of GMP from XMP.	tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.	0.414
lptF	rumA	DM82_397	DM82_1497	Putative permease YjgP/YjgQ family protein.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.576
lysS	guaA	DM82_1885	DM82_1711	lysS_bact: lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.939
lysS	rumA	DM82_1885	DM82_1497	lysS_bact: lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.714
rlmB_2	rsmB_2	DM82_1728	DM82_300	spoU rRNA Methylase family protein.	ubiE/COQ5 methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.511
rlmB_2	rsmI_1	DM82_1728	DM82_2067	spoU rRNA Methylase family protein.	Tetrapyrrole (Corrin/Porphyrin) Methylases family protein.	0.619
rlmB_2	rumA	DM82_1728	DM82_1497	spoU rRNA Methylase family protein.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.606
rsmB_2	guaA	DM82_300	DM82_1711	ubiE/COQ5 methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	GMP synthase; Catalyzes the synthesis of GMP from XMP.	0.442
rsmB_2	rlmB_2	DM82_300	DM82_1728	ubiE/COQ5 methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	spoU rRNA Methylase family protein.	0.511
rsmB_2	rsmI_1	DM82_300	DM82_2067	ubiE/COQ5 methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	Tetrapyrrole (Corrin/Porphyrin) Methylases family protein.	0.528
rsmB_2	rumA	DM82_300	DM82_1497	ubiE/COQ5 methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.	0.555

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