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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acoAAcetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha. (327 aa)    
Predicted Functional Partners:
acoB
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta.
 0.999
pdhB
Transketolase, C-terminal domain protein.
 0.998
bkdA2
2-oxoisovalerate dehydrogenase subunit beta.
 0.998
lpdA-2
lipoamide_DH: dihydrolipoyl dehydrogenase.
  
 0.995
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 
 0.975
bkdB
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
 
 0.925
sucB
Dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.920
pdhC
E3 binding domain protein.
 
 0.913
DM82_1521
Diacylglycerol kinase catalytic domain protein.
 
  
 0.881
lpdA-3
lipoamide_DH: dihydrolipoyl dehydrogenase.
 
 
 0.849
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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