Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
budC_1Short chain dehydrogenase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)    
Predicted Functional Partners:
dhbF_2
AA-adenyl-dom: amino acid adenylation domain protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 
 0.756
bphB
Short chain dehydrogenase family protein.
  
     0.742
DM82_1521
Diacylglycerol kinase catalytic domain protein.
       0.710
lgrD_1
NRPS-para261: non-ribosomal peptide synthase TIGR01720 domain protein.
  
 
 0.697
tycC_2
AA-adenyl-dom: amino acid adenylation domain protein.
  
 
 0.697
tycA
AA-adenyl-dom: amino acid adenylation domain protein.
 
 
 0.660
acoC
Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system.
 
 0.602
DM82_4887
Acyltransferase family protein.
  
 
 0.549
DM82_4589
Hypothetical protein; acyl-CoA dehydrogenase, N-terminal domain protein.
  
 0.532
acoA
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
   
   0.524
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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