Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ygaUBON domain protein. (156 aa)    
Predicted Functional Partners:
DM82_3336
Phage tail sheath family protein.
  
 
 0.946
DM82_1185
Putative bacteriophage protein.
  
 
 0.926
DM82_3339
tail_P2_I: phage tail protein I.
  
 
 0.897
DM82_3057
25-like lysozyme family protein.
  
 
 0.892
DM82_3341
25-like lysozyme family protein.
  
 
 0.892
osmY_2
BON domain protein.
  
  
 0.873
pilQ
IV_pilus_PilQ: type IV pilus secretin PilQ family protein.
   
 
 0.861
DM82_2417
Hypothetical protein.
   
  
 0.802
DM82_3330
Phage late control D family protein.
  
   0.799
DM82_730
Pyocin R2 PP, tail formation domain protein.
  
   0.799
Your Current Organism:
Burkholderia oklahomensis
NCBI taxonomy Id: 342113
Other names: B. oklahomensis, Burkholderia oklahomensis Glass et al. 2006, CCUG 51349, DSM 21774, LMG 23618, LMG:23618, NCTC 13387, strain C6786
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