Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DM82_1571 | DM82_1572 | DM82_1571 | DM82_1572 | Putative transmembrane protein. | Hypothetical protein. | 0.442 |
DM82_1572 | DM82_1571 | DM82_1572 | DM82_1571 | Hypothetical protein. | Putative transmembrane protein. | 0.442 |
DM82_1572 | DM82_1661 | DM82_1572 | DM82_1661 | Hypothetical protein. | Hypothetical protein. | 0.546 |
DM82_1572 | DM82_2464 | DM82_1572 | DM82_2464 | Hypothetical protein. | Chain length determinant family protein. | 0.491 |
DM82_1572 | DM82_2476 | DM82_1572 | DM82_2476 | Hypothetical protein. | Capsule polysaccharide biosynthesis family protein. | 0.524 |
DM82_1572 | DM82_4091 | DM82_1572 | DM82_4091 | Hypothetical protein. | Hypothetical protein. | 0.520 |
DM82_1572 | DM82_4092 | DM82_1572 | DM82_4092 | Hypothetical protein. | Hypothetical protein. | 0.513 |
DM82_1572 | glmS | DM82_1572 | DM82_3529 | Hypothetical protein. | Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.426 |
DM82_1572 | glmS-2 | DM82_1572 | DM82_6306 | Hypothetical protein. | Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.426 |
DM82_1661 | DM82_1572 | DM82_1661 | DM82_1572 | Hypothetical protein. | Hypothetical protein. | 0.546 |
DM82_1661 | DM82_4091 | DM82_1661 | DM82_4091 | Hypothetical protein. | Hypothetical protein. | 0.523 |
DM82_1661 | DM82_4092 | DM82_1661 | DM82_4092 | Hypothetical protein. | Hypothetical protein. | 0.429 |
DM82_2464 | DM82_1572 | DM82_2464 | DM82_1572 | Chain length determinant family protein. | Hypothetical protein. | 0.491 |
DM82_2464 | DM82_2476 | DM82_2464 | DM82_2476 | Chain length determinant family protein. | Capsule polysaccharide biosynthesis family protein. | 0.976 |
DM82_2476 | DM82_1572 | DM82_2476 | DM82_1572 | Capsule polysaccharide biosynthesis family protein. | Hypothetical protein. | 0.524 |
DM82_2476 | DM82_2464 | DM82_2476 | DM82_2464 | Capsule polysaccharide biosynthesis family protein. | Chain length determinant family protein. | 0.976 |
DM82_4091 | DM82_1572 | DM82_4091 | DM82_1572 | Hypothetical protein. | Hypothetical protein. | 0.520 |
DM82_4091 | DM82_1661 | DM82_4091 | DM82_1661 | Hypothetical protein. | Hypothetical protein. | 0.523 |
DM82_4091 | DM82_4092 | DM82_4091 | DM82_4092 | Hypothetical protein. | Hypothetical protein. | 0.947 |
DM82_4092 | DM82_1572 | DM82_4092 | DM82_1572 | Hypothetical protein. | Hypothetical protein. | 0.513 |
page 1 of 2